You are being dubious as usual.
All Wakf members are muslims. And no, Wakf does not mean all mosques are under it. Please educate yourself.
Let me tell you the differences.
1. Endowment act allows govt to hire muslim, Christian or Atheist to work in any temple administration. Not the case with Mosques and Churches. You won't find anyone else except their faith working in them.
2. Endowment act allows govt to collect all the funds of the temples and release any amount back to temple development. For Example in 2014, only 10% money collected in temples was given back to develop temples. Rest 90% was utilized for non-Hindu dharmic activities of the govt. In effect govt used temple money for subsidies, which have nothing to do with Hinduism and temples. NOT the case with mosques and Churches. Any money collected will stay with them and not the govt.
3. Endowment act allows temple property to be used in any manner by the govt. Numerous cases of this land being leased for other religious activities is rampant. Not so with mosques and churches.
simply put, what right has the govt got to use temple money to anything except for propagation of Hinduism?